J6_9JMK_002
3D structure
- PDB id
- 9JMK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S Ribosomal Subunit precursor state III
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UUUA*UUUG*CU*AGCA*UCAUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 9JMK|1|A|U|2076, 9JMK|1|A|A|2388, 9JMK|1|A|U|2390, 9JMK|1|A|G|2428, 9JMK|1|A|A|2430
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9JMK|1|A|U|2074
9JMK|1|A|U|2075
9JMK|1|A|U|2076
9JMK|1|A|A|2077
*
9JMK|1|A|U|2243
9JMK|1|A|U|2244
9JMK|1|A|U|2245
9JMK|1|A|G|2246
*
9JMK|1|A|C|2258
9JMK|1|A|U|2259
*
9JMK|1|A|A|2281
9JMK|1|A|G|2282
9JMK|1|A|C|2283
9JMK|1|A|A|2284
*
9JMK|1|A|U|2384
9JMK|1|A|C|2385
9JMK|1|A|A|2386
9JMK|1|A|U|2387
9JMK|1|A|A|2388
9JMK|1|A|G|2389
9JMK|1|A|U|2390
9JMK|1|A|G|2391
9JMK|1|A|A|2392
9JMK|1|A|U|2393
9JMK|1|A|C|2394
9JMK|1|A|C|2395
*
9JMK|1|A|G|2421
9JMK|1|A|C|2422
9JMK|1|A|U|2423
9JMK|1|A|C|2424
9JMK|1|A|A|2425
9JMK|1|A|A|2426
9JMK|1|A|C|2427
9JMK|1|A|G|2428
9JMK|1|A|G|2429
9JMK|1|A|A|2430
9JMK|1|A|U|2431
9JMK|1|A|A|2432
9JMK|1|A|A|2433
9JMK|1|A|A|2434
9JMK|1|A|A|2435
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L33
- Chain 3
- 50S ribosomal protein L35
- Chain C
- 50S ribosomal protein L2
- Chain L
- 50S ribosomal protein L15
- Chain W
- 50S ribosomal protein L27
- Chain X
- 50S ribosomal protein L28
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