3D structure

PDB id
9QEG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
Experimental method
ELECTRON MICROSCOPY
Resolution
2.21 Å

Loop

Sequence
GC*GCACAC*GGAAGAGAAAG*CGAUU*AAGAG*CUAAAUAC
Length
37 nucleotides
Bulged bases
9QEG|1|A|A|226
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QEG|1|A|G|45
9QEG|1|A|C|46
*
9QEG|1|A|G|181
9QEG|1|A|C|182
9QEG|1|A|A|183
9QEG|1|A|C|184
9QEG|1|A|A|185
9QEG|1|A|C|186
*
9QEG|1|A|G|217
9QEG|1|A|G|218
9QEG|1|A|A|219
9QEG|1|A|A|220
9QEG|1|A|G|221
9QEG|1|A|A|222
9QEG|1|A|G|223
9QEG|1|A|A|224
9QEG|1|A|A|225
9QEG|1|A|A|226
9QEG|1|A|G|227
*
9QEG|1|A|C|234
9QEG|1|A|G|235
9QEG|1|A|A|236
9QEG|1|A|U|237
9QEG|1|A|U|238
*
9QEG|1|A|A|265
9QEG|1|A|A|266
9QEG|1|A|G|267
9QEG|1|A|A|268
9QEG|1|A|G|269
*
9QEG|1|A|C|472
9QEG|1|A|U|473
9QEG|1|A|A|474
9QEG|1|A|A|475
9QEG|1|A|A|476
9QEG|1|A|U|477
9QEG|1|A|A|478
9QEG|1|A|C|479

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 2
Large ribosomal subunit protein bL34

Coloring options:

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