J6_9QSA_002
3D structure
- PDB id
- 9QSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-1 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG
- Length
- 27 nucleotides
- Bulged bases
- 9QSA|1|A2|C|1314, 9QSA|1|A2|G|1315
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QSA|1|A2|C|1166
9QSA|1|A2|G|1167
9QSA|1|A2|A|1168
9QSA|1|A2|G|1169
*
9QSA|1|A2|C|1198
9QSA|1|A2|G|1199
9QSA|1|A2|C|1200
9QSA|1|A2|A|1201
9QSA|1|A2|A|1202
*
9QSA|1|A2|U|1209
9QSA|1|A2|G|1210
9QSA|1|A2|A|1211
9QSA|1|A2|A|1212
9QSA|1|A2|G|1213
*
9QSA|1|A2|C|1231
9QSA|1|A2|G|1232
9QSA|1|A2|A|1233
9QSA|1|A2|G|1234
*
9QSA|1|A2|C|1277
9QSA|1|A2|G|1278
9QSA|1|A2|G|1279
*
9QSA|1|A2|C|1312
9QSA|1|A2|A|1313
9QSA|1|A2|C|1314
9QSA|1|A2|G|1315
9QSA|1|A2|A|1316
9QSA|1|A2|G|1317
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain F1
- Large ribosomal subunit protein eL13
- Chain F2
- Large ribosomal subunit protein uL4
- Chain K2
- Large ribosomal subunit protein eL18
- Chain U2
- Large ribosomal subunit protein uL15
- Chain V2
- Large ribosomal subunit protein eL29
- Chain c2
- Large ribosomal subunit protein eL36
Coloring options: