J6_9RHU_001
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- GGCGAC*GGAAAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUC
- Length
- 38 nucleotides
- Bulged bases
- 9RHU|1|A3|A|66, 9RHU|1|C3|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|A3|G|21
9RHU|1|A3|G|22
9RHU|1|A3|C|23
9RHU|1|A3|G|24
9RHU|1|A3|A|25
9RHU|1|A3|C|26
*
9RHU|1|A3|G|57
9RHU|1|A3|G|58
9RHU|1|A3|A|59
9RHU|1|A3|A|60
9RHU|1|A3|A|61
9RHU|1|A3|A|62
9RHU|1|A3|G|63
9RHU|1|A3|A|64
9RHU|1|A3|A|65
9RHU|1|A3|A|66
9RHU|1|A3|C|67
*
9RHU|1|A3|G|74
9RHU|1|A3|G|75
9RHU|1|A3|A|76
9RHU|1|A3|U|77
9RHU|1|A3|U|78
*
9RHU|1|A3|A|105
9RHU|1|A3|A|106
9RHU|1|A3|G|107
9RHU|1|A3|A|108
9RHU|1|A3|G|109
*
9RHU|1|A3|C|332
9RHU|1|A3|U|333
9RHU|1|A3|A|334
9RHU|1|A3|A|335
9RHU|1|A3|A|336
9RHU|1|A3|U|337
9RHU|1|A3|A|338
9RHU|1|A3|C|339
*
9RHU|1|C3|G|33
9RHU|1|C3|U|34
9RHU|1|C3|C|35
Current chains
- Chain A3
- 28S rRNA
- Chain C3
- 5.8S rRNA
Nearby chains
- Chain H2
- Large ribosomal subunit protein eL13
- Chain J2
- Ribosomal protein L15
- Chain d2
- 60S ribosomal protein L35
- Chain e2
- Large ribosomal subunit protein eL36
- Chain f2
- Ribosomal protein L37
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