J6_9RVC_001
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GC*GCACAC*GGAAGAGAAAG*CGAUU*AAGAG*CUAAAUAC
- Length
- 37 nucleotides
- Bulged bases
- 9RVC|1|a|C|184, 9RVC|1|a|A|226
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RVC|1|a|G|45
9RVC|1|a|C|46
*
9RVC|1|a|G|181
9RVC|1|a|C|182
9RVC|1|a|A|183
9RVC|1|a|C|184
9RVC|1|a|A|185
9RVC|1|a|C|186
*
9RVC|1|a|G|217
9RVC|1|a|G|218
9RVC|1|a|A|219
9RVC|1|a|A|220
9RVC|1|a|G|221
9RVC|1|a|A|222
9RVC|1|a|G|223
9RVC|1|a|A|224
9RVC|1|a|A|225
9RVC|1|a|A|226
9RVC|1|a|G|227
*
9RVC|1|a|C|234
9RVC|1|a|G|235
9RVC|1|a|A|236
9RVC|1|a|U|237
9RVC|1|a|U|238
*
9RVC|1|a|A|265
9RVC|1|a|A|266
9RVC|1|a|G|267
9RVC|1|a|A|268
9RVC|1|a|G|269
*
9RVC|1|a|C|472
9RVC|1|a|U|473
9RVC|1|a|A|474
9RVC|1|a|A|475
9RVC|1|a|A|476
9RVC|1|a|U|477
9RVC|1|a|A|478
9RVC|1|a|C|479
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 1
- Large ribosomal subunit protein bL34
- Chain e
- Large ribosomal subunit protein uL4
Coloring options: