J6_9SYR_001
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- GGCGAC*GGAGAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUC
- Length
- 38 nucleotides
- Bulged bases
- 9SYR|1|L1|A|66, 9SYR|1|L3|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SYR|1|L1|G|21
9SYR|1|L1|G|22
9SYR|1|L1|C|23
9SYR|1|L1|G|24
9SYR|1|L1|A|25
9SYR|1|L1|C|26
*
9SYR|1|L1|G|57
9SYR|1|L1|G|58
9SYR|1|L1|A|59
9SYR|1|L1|G|60
9SYR|1|L1|A|61
9SYR|1|L1|A|62
9SYR|1|L1|G|63
9SYR|1|L1|A|64
9SYR|1|L1|A|65
9SYR|1|L1|A|66
9SYR|1|L1|C|67
*
9SYR|1|L1|G|74
9SYR|1|L1|G|75
9SYR|1|L1|A|76
9SYR|1|L1|U|77
9SYR|1|L1|U|78
*
9SYR|1|L1|A|105
9SYR|1|L1|A|106
9SYR|1|L1|G|107
9SYR|1|L1|A|108
9SYR|1|L1|G|109
*
9SYR|1|L1|C|332
9SYR|1|L1|U|333
9SYR|1|L1|A|334
9SYR|1|L1|A|335
9SYR|1|L1|A|336
9SYR|1|L1|U|337
9SYR|1|L1|A|338
9SYR|1|L1|C|339
*
9SYR|1|L3|G|33
9SYR|1|L3|U|34
9SYR|1|L3|C|35
Current chains
- Chain L1
- 28S rRNA
- Chain L3
- 5.8S rRNA
Nearby chains
- Chain LA
- Large ribosomal subunit protein eL37
- Chain LH
- 60S ribosomal protein L15
- Chain LP
- Large ribosomal subunit protein eL13
- Chain Ly
- 60S ribosomal protein L35
- Chain Lz
- 60S ribosomal protein L36
Coloring options: