J6_9TKR_001

3D structure

PDB id

9TKR (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S elongation competent complex (70S EC)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9TKR|1|D2|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKR|1|D2|G|45
9TKR|1|D2|G|46
*
9TKR|1|D2|C|179
9TKR|1|D2|G|180
9TKR|1|D2|A|181
9TKR|1|D2|A|182
9TKR|1|D2|C|183
*
9TKR|1|D2|G|214
9TKR|1|D2|G|215
9TKR|1|D2|A|216
9TKR|1|D2|A|217
9TKR|1|D2|A|218
9TKR|1|D2|A|219
9TKR|1|D2|G|220
9TKR|1|D2|A|221
9TKR|1|D2|A|222
9TKR|1|D2|A|223
9TKR|1|D2|U|224
*
9TKR|1|D2|A|231
9TKR|1|D2|G|232
9TKR|1|D2|A|233
9TKR|1|D2|U|234
9TKR|1|D2|U|235
*
9TKR|1|D2|A|262
9TKR|1|D2|G|263
9TKR|1|D2|C|264
9TKR|1|D2|A|265
9TKR|1|D2|G|266
*
9TKR|1|D2|C|426
9TKR|1|D2|U|427
9TKR|1|D2|A|428
9TKR|1|D2|A|429
9TKR|1|D2|A|430
9TKR|1|D2|U|431
9TKR|1|D2|A|432
9TKR|1|D2|C|433

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain B7

Large ribosomal subunit protein bL34