J6_9W0N_001
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 9W0N|1|1|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9W0N|1|1|G|45
9W0N|1|1|G|46
*
9W0N|1|1|C|179
9W0N|1|1|G|180
9W0N|1|1|A|181
9W0N|1|1|A|182
9W0N|1|1|C|183
*
9W0N|1|1|G|214
9W0N|1|1|G|215
9W0N|1|1|A|216
9W0N|1|1|A|217
9W0N|1|1|A|218
9W0N|1|1|A|219
9W0N|1|1|G|220
9W0N|1|1|A|221
9W0N|1|1|A|222
9W0N|1|1|A|223
9W0N|1|1|U|224
*
9W0N|1|1|A|231
9W0N|1|1|G|232
9W0N|1|1|A|233
9W0N|1|1|U|234
9W0N|1|1|U|235
*
9W0N|1|1|A|262
9W0N|1|1|G|263
9W0N|1|1|C|264
9W0N|1|1|A|265
9W0N|1|1|G|266
*
9W0N|1|1|C|426
9W0N|1|1|U|427
9W0N|1|1|A|428
9W0N|1|1|A|429
9W0N|1|1|A|430
9W0N|1|1|U|431
9W0N|1|1|A|432
9W0N|1|1|C|433
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain D
- Large ribosomal subunit protein bL34
Coloring options: