3D structure

PDB id
9WNQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of E.coli ribosome in complex with an engineered arrest peptide
Experimental method
ELECTRON MICROSCOPY
Resolution
2.59 Å

Loop

Sequence
GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
Length
36 nucleotides
Bulged bases
9WNQ|1|b|A|223
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9WNQ|1|b|G|45
9WNQ|1|b|G|46
*
9WNQ|1|b|C|179
9WNQ|1|b|G|180
9WNQ|1|b|A|181
9WNQ|1|b|A|182
9WNQ|1|b|C|183
*
9WNQ|1|b|G|214
9WNQ|1|b|G|215
9WNQ|1|b|A|216
9WNQ|1|b|A|217
9WNQ|1|b|A|218
9WNQ|1|b|A|219
9WNQ|1|b|G|220
9WNQ|1|b|A|221
9WNQ|1|b|A|222
9WNQ|1|b|A|223
9WNQ|1|b|U|224
*
9WNQ|1|b|A|231
9WNQ|1|b|G|232
9WNQ|1|b|A|233
9WNQ|1|b|U|234
9WNQ|1|b|U|235
*
9WNQ|1|b|A|262
9WNQ|1|b|G|263
9WNQ|1|b|C|264
9WNQ|1|b|A|265
9WNQ|1|b|G|266
*
9WNQ|1|b|C|426
9WNQ|1|b|U|427
9WNQ|1|b|A|428
9WNQ|1|b|A|429
9WNQ|1|b|A|430
9WNQ|1|b|U|431
9WNQ|1|b|A|432
9WNQ|1|b|C|433

Current chains

Chain b
23S ribosomal RNA

Nearby chains

Chain 6
50S ribosomal protein L34

Coloring options:

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