J6_9ZHP_001

3D structure

PDB id

9ZHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 36

Experimental method

ELECTRON MICROSCOPY

Resolution

3.12 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GAC*GUAGAUAGAUG

Length

42 nucleotides

Bulged bases

9ZHP|1|A|U|52, 9ZHP|1|A|A|256, 9ZHP|1|A|A|334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZHP|1|A|C|21
9ZHP|1|A|G|22
9ZHP|1|A|C|23
*
9ZHP|1|A|G|44
9ZHP|1|A|A|45
9ZHP|1|A|G|46
9ZHP|1|A|G|47
9ZHP|1|A|A|48
9ZHP|1|A|A|49
9ZHP|1|A|A|50
9ZHP|1|A|G|51
9ZHP|1|A|U|52
9ZHP|1|A|C|53
9ZHP|1|A|C|54
9ZHP|1|A|A|55
9ZHP|1|A|U|56
9ZHP|1|A|G|57
9ZHP|1|A|C|58
*
9ZHP|1|A|G|254
9ZHP|1|A|A|255
9ZHP|1|A|A|256
9ZHP|1|A|A|257
9ZHP|1|A|C|258
*
9ZHP|1|A|G|274
9ZHP|1|A|G|275
9ZHP|1|A|C|276
9ZHP|1|A|A|277
9ZHP|1|A|C|278
*
9ZHP|1|A|G|307
9ZHP|1|A|A|308
9ZHP|1|A|C|309
*
9ZHP|1|A|G|328
9ZHP|1|A|U|329
9ZHP|1|A|A|330
9ZHP|1|A|G|331
9ZHP|1|A|A|332
9ZHP|1|A|U|333
9ZHP|1|A|A|334
9ZHP|1|A|G|335
9ZHP|1|A|A|336
9ZHP|1|A|U|337
9ZHP|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains