J7_2J28_001
3D structure
- PDB id
- 2J28 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MODEL OF E. COLI SRP BOUND TO 70S RNCS
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 2J28|1|B|A|10, 2J28|1|B|C|11, 2J28|1|B|C|2021
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2J28|1|B|C|8
2J28|1|B|G|9
2J28|1|B|A|10
2J28|1|B|C|11
2J28|1|B|U|12
2J28|1|B|A|13
2J28|1|B|A|14
2J28|1|B|G|15
*
2J28|1|B|U|525
2J28|1|B|A|526
2J28|1|B|C|527
2J28|1|B|A|528
2J28|1|B|A|529
2J28|1|B|G|530
2J28|1|B|C|531
*
2J28|1|B|G|2018
2J28|1|B|A|2019
2J28|1|B|A|2020
2J28|1|B|C|2021
2J28|1|B|U|2022
2J28|1|B|C|2023
*
2J28|1|B|G|2040
2J28|1|B|U|2041
2J28|1|B|A|2042
2J28|1|B|C|2043
*
2J28|1|B|G|2625
2J28|1|B|C|2626
2J28|1|B|G|2627
2J28|1|B|C|2628
2J28|1|B|U|2629
2J28|1|B|G|2630
*
2J28|1|B|C|2788
2J28|1|B|C|2789
*
2J28|1|B|G|2894
2J28|1|B|G|2895
Current chains
- Chain B
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 0
- 50S RIBOSOMAL PROTEIN L32
- Chain D
- 50S RIBOSOMAL PROTEIN L3
- Chain J
- 50S RIBOSOMAL PROTEIN L13
- Chain Q
- 50S RIBOSOMAL PROTEIN L20
- Chain S
- 50S RIBOSOMAL PROTEIN L22
Coloring options: