J7_3J78_001
3D structure
- PDB id
- 3J78 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.3 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGAUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 3J78|1|2S|G|1116
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J78|1|2S|C|949
3J78|1|2S|G|950
3J78|1|2S|A|951
3J78|1|2S|A|952
3J78|1|2S|G|953
3J78|1|2S|U|954
*
3J78|1|2S|A|967
3J78|1|2S|G|968
*
3J78|1|2S|U|1114
3J78|1|2S|G|1115
3J78|1|2S|G|1116
3J78|1|2S|G|1117
*
3J78|1|2S|C|1141
3J78|1|2S|G|1142
3J78|1|2S|A|1143
3J78|1|2S|U|1144
3J78|1|2S|G|1145
3J78|1|2S|C|1146
*
3J78|1|2S|G|1157
3J78|1|2S|A|1158
3J78|1|2S|A|1159
3J78|1|2S|C|1160
3J78|1|2S|G|1161
*
3J78|1|2S|C|1338
3J78|1|2S|C|1339
*
3J78|1|2S|G|1365
3J78|1|2S|A|1366
3J78|1|2S|G|1367
3J78|1|2S|U|1368
3J78|1|2S|A|1369
3J78|1|2S|G|1370
Current chains
- Chain 2S
- 25S ribosomal RNA
Nearby chains
- Chain 5S
- 5S ribosomal RNA; 5S rRNA
- Chain 63
- 60S ribosomal protein L13
- Chain 68
- 60S ribosomal protein L18
- Chain 71
- 60S ribosomal protein L21
- Chain 78
- 60S ribosomal protein L28
- Chain 79
- 60S ribosomal protein L29
- Chain 82
- 60S ribosomal protein L32
- Chain 83
- 60S ribosomal protein L33
- Chain L4
- 60S ribosomal protein L4
- Chain L7
- 60S ribosomal protein L7
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