3D structure

PDB id
3J8G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
5 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
3J8G|1|B|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J8G|1|B|C|8
3J8G|1|B|G|9
3J8G|1|B|A|10
3J8G|1|B|C|11
3J8G|1|B|U|12
3J8G|1|B|A|13
3J8G|1|B|A|14
3J8G|1|B|G|15
*
3J8G|1|B|U|525
3J8G|1|B|A|526
3J8G|1|B|C|527
3J8G|1|B|A|528
3J8G|1|B|A|529
3J8G|1|B|G|530
3J8G|1|B|C|531
*
3J8G|1|B|G|2018
3J8G|1|B|A|2019
3J8G|1|B|A|2020
3J8G|1|B|C|2021
3J8G|1|B|U|2022
3J8G|1|B|C|2023
*
3J8G|1|B|G|2040
3J8G|1|B|U|2041
3J8G|1|B|A|2042
3J8G|1|B|C|2043
*
3J8G|1|B|G|2625
3J8G|1|B|C|2626
3J8G|1|B|G|2627
3J8G|1|B|C|2628
3J8G|1|B|U|2629
3J8G|1|B|G|2630
*
3J8G|1|B|C|2788
3J8G|1|B|C|2789
*
3J8G|1|B|G|2894
3J8G|1|B|G|2895

Current chains

Chain B
23S rRNA

Nearby chains

Chain 3
50S ribosomal protein L32
Chain D
50S ribosomal protein L3
Chain J
50S ribosomal protein L13
Chain Q
50S ribosomal protein L20
Chain S
50S ribosomal protein L22

Coloring options:

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