3D structure

PDB id
3J8G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
5 Å

Loop

Sequence
CGAAAG*CGC*GACACA*UGAAGAG*CAGAC*GC*GGGUAG
Length
35 nucleotides
Bulged bases
3J8G|1|B|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J8G|1|B|C|817
3J8G|1|B|G|818
3J8G|1|B|A|819
3J8G|1|B|A|820
3J8G|1|B|A|821
3J8G|1|B|G|822
*
3J8G|1|B|C|835
3J8G|1|B|G|836
3J8G|1|B|C|837
*
3J8G|1|B|G|942
3J8G|1|B|A|943
3J8G|1|B|C|944
3J8G|1|B|A|945
3J8G|1|B|C|946
3J8G|1|B|A|947
*
3J8G|1|B|U|970
3J8G|1|B|G|971
3J8G|1|B|A|972
3J8G|1|B|A|973
3J8G|1|B|G|974
3J8G|1|B|A|975
3J8G|1|B|G|976
*
3J8G|1|B|C|987
3J8G|1|B|A|988
3J8G|1|B|G|989
3J8G|1|B|A|990
3J8G|1|B|C|991
*
3J8G|1|B|G|1163
3J8G|1|B|C|1164
*
3J8G|1|B|G|1185
3J8G|1|B|G|1186
3J8G|1|B|G|1187
3J8G|1|B|U|1188
3J8G|1|B|A|1189
3J8G|1|B|G|1190

Current chains

Chain B
23S rRNA

Nearby chains

Chain 2
50S ribosomal protein L30
Chain 7
50S ribosomal protein L35
Chain A
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21

Coloring options:

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