J7_3JBN_001
3D structure
- PDB id
- 3JBN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CGAAAGA*UCG*UGGG*CGAUGA*UAACG*CC*GAGUAG
- Length
- 33 nucleotides
- Bulged bases
- 3JBN|1|AA|G|1244
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBN|1|AA|C|1068
3JBN|1|AA|G|1069
3JBN|1|AA|A|1070
3JBN|1|AA|A|1071
3JBN|1|AA|A|1072
3JBN|1|AA|G|1073
3JBN|1|AA|A|1074
*
3JBN|1|AA|U|1085
3JBN|1|AA|C|1086
3JBN|1|AA|G|1087
*
3JBN|1|AA|U|1242
3JBN|1|AA|G|1243
3JBN|1|AA|G|1244
3JBN|1|AA|G|1245
*
3JBN|1|AA|C|1269
3JBN|1|AA|G|1270
3JBN|1|AA|A|1271
3JBN|1|AA|U|1272
3JBN|1|AA|G|1273
3JBN|1|AA|A|1274
*
3JBN|1|AA|U|1285
3JBN|1|AA|A|1286
3JBN|1|AA|A|1287
3JBN|1|AA|C|1288
3JBN|1|AA|G|1289
*
3JBN|1|AA|C|1466
3JBN|1|AA|C|1467
*
3JBN|1|AA|G|1514
3JBN|1|AA|A|1515
3JBN|1|AA|G|1516
3JBN|1|AA|U|1517
3JBN|1|AA|A|1518
3JBN|1|AA|G|1519
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain A4
- 60S ribosomal protein eL29
- Chain A5
- 60S ribosomal protein uL30
- Chain A8
- 60S ribosomal protein eL32
- Chain A9
- 60S ribosomal protein eL33
- Chain AB
- 5S ribosomal RNA; 5S rRNA
- Chain AF
- 60S ribosomal protein uL4
- Chain AL
- 60S ribosomal protein eL13
- Chain AO
- 60S ribosomal protein uL15
- Chain AS
- 60S ribosomal protein eL18
- Chain AV
- 60S ribosomal protein eL21
Coloring options: