J7_3JBV_001
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- CGACUAAGCGUACACG*CGUGUACGUACAAGC*GAACUCG*UGUAC*GCGCUG*CC*GG
- Length
- 53 nucleotides
- Bulged bases
- 3JBV|1|b|U|12, 3JBV|1|b|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBV|1|b|C|8
3JBV|1|b|G|9
3JBV|1|b|A|10
3JBV|1|b|C|11
3JBV|1|b|U|12
3JBV|1|b|A|13
3JBV|1|b|A|14
3JBV|1|b|G|15
3JBV|1|b|C|16
3JBV|1|b|G|17
3JBV|1|b|U|18
3JBV|1|b|A|19
3JBV|1|b|C|20
3JBV|1|b|A|21
3JBV|1|b|C|22
3JBV|1|b|G|23
*
3JBV|1|b|C|517
3JBV|1|b|G|518
3JBV|1|b|U|519
3JBV|1|b|G|520
3JBV|1|b|U|521
3JBV|1|b|A|522
3JBV|1|b|C|523
3JBV|1|b|G|524
3JBV|1|b|U|525
3JBV|1|b|A|526
3JBV|1|b|C|527
3JBV|1|b|A|528
3JBV|1|b|A|529
3JBV|1|b|G|530
3JBV|1|b|C|531
*
3JBV|1|b|G|2018
3JBV|1|b|A|2019
3JBV|1|b|A|2020
3JBV|1|b|C|2021
3JBV|1|b|U|2022
3JBV|1|b|C|2023
3JBV|1|b|G|2024
*
3JBV|1|b|U|2039
3JBV|1|b|G|2040
3JBV|1|b|U|2041
3JBV|1|b|A|2042
3JBV|1|b|C|2043
*
3JBV|1|b|G|2625
3JBV|1|b|C|2626
3JBV|1|b|G|2627
3JBV|1|b|C|2628
3JBV|1|b|U|2629
3JBV|1|b|G|2630
*
3JBV|1|b|C|2788
3JBV|1|b|C|2789
*
3JBV|1|b|G|2894
3JBV|1|b|G|2895
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain 3
- 50S ribosomal protein L32
- Chain d
- 50S ribosomal protein L11
- Chain j
- 50S ribosomal protein L13
- Chain q
- 50S ribosomal protein L20
- Chain r
- 50S ribosomal protein L21
- Chain s
- 50S ribosomal protein L22
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