J7_3JBV_002
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- CGAAAGCU*AGCGCC*GAGACAC*GAAGAGG*CCAGAC*GC*GGGUAG
- Length
- 42 nucleotides
- Bulged bases
- 3JBV|1|b|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBV|1|b|C|817
3JBV|1|b|G|818
3JBV|1|b|A|819
3JBV|1|b|A|820
3JBV|1|b|A|821
3JBV|1|b|G|822
3JBV|1|b|C|823
3JBV|1|b|U|824
*
3JBV|1|b|A|833
3JBV|1|b|G|834
3JBV|1|b|C|835
3JBV|1|b|G|836
3JBV|1|b|C|837
3JBV|1|b|C|838
*
3JBV|1|b|G|940
3JBV|1|b|A|941
3JBV|1|b|G|942
3JBV|1|b|A|943
3JBV|1|b|C|944
3JBV|1|b|A|945
3JBV|1|b|C|946
*
3JBV|1|b|G|971
3JBV|1|b|A|972
3JBV|1|b|A|973
3JBV|1|b|G|974
3JBV|1|b|A|975
3JBV|1|b|G|976
3JBV|1|b|G|977
*
3JBV|1|b|C|986
3JBV|1|b|C|987
3JBV|1|b|A|988
3JBV|1|b|G|989
3JBV|1|b|A|990
3JBV|1|b|C|991
*
3JBV|1|b|G|1163
3JBV|1|b|C|1164
*
3JBV|1|b|G|1185
3JBV|1|b|G|1186
3JBV|1|b|G|1187
3JBV|1|b|U|1188
3JBV|1|b|A|1189
3JBV|1|b|G|1190
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain 2
- 50S ribosomal protein L30
- Chain 7
- 50S ribosomal protein L35
- Chain a
- 5S ribosomal RNA; 5S rRNA
- Chain l
- 50S ribosomal protein L15
- Chain q
- 50S ribosomal protein L20
- Chain r
- 50S ribosomal protein L21
- Chain y
- 50S ribosomal protein L27
Coloring options: