J7_3JBV_003
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- UUUA*UUUG*CU*AGC*GC*GUGAUCC*GCUCAACGGAUAAAA
- Length
- 37 nucleotides
- Bulged bases
- 3JBV|1|b|U|2076, 3JBV|1|b|U|2390, 3JBV|1|b|G|2428, 3JBV|1|b|A|2430
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBV|1|b|U|2074
3JBV|1|b|U|2075
3JBV|1|b|U|2076
3JBV|1|b|A|2077
*
3JBV|1|b|U|2243
3JBV|1|b|U|2244
3JBV|1|b|U|2245
3JBV|1|b|G|2246
*
3JBV|1|b|C|2258
3JBV|1|b|U|2259
*
3JBV|1|b|A|2281
3JBV|1|b|G|2282
3JBV|1|b|C|2283
*
3JBV|1|b|G|2325
3JBV|1|b|C|2326
*
3JBV|1|b|G|2389
3JBV|1|b|U|2390
3JBV|1|b|G|2391
3JBV|1|b|A|2392
3JBV|1|b|U|2393
3JBV|1|b|C|2394
3JBV|1|b|C|2395
*
3JBV|1|b|G|2421
3JBV|1|b|C|2422
3JBV|1|b|U|2423
3JBV|1|b|C|2424
3JBV|1|b|A|2425
3JBV|1|b|A|2426
3JBV|1|b|C|2427
3JBV|1|b|G|2428
3JBV|1|b|G|2429
3JBV|1|b|A|2430
3JBV|1|b|U|2431
3JBV|1|b|A|2432
3JBV|1|b|A|2433
3JBV|1|b|A|2434
3JBV|1|b|A|2435
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain 0
- 50S ribosomal protein L28
- Chain 4
- 50S ribosomal protein L33
- Chain 7
- 50S ribosomal protein L35
- Chain W
- Transfer RNA; tRNA
- Chain c
- 50S ribosomal protein L2
- Chain l
- 50S ribosomal protein L15
- Chain y
- 50S ribosomal protein L27
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