J7_3JCE_003

3D structure

PDB id

3JCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

3JCE|1|A|C|2021

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCE|1|A|C|8
3JCE|1|A|G|9
3JCE|1|A|A|10
3JCE|1|A|C|11
3JCE|1|A|U|12
3JCE|1|A|A|13
3JCE|1|A|A|14
3JCE|1|A|G|15
*
3JCE|1|A|U|525
3JCE|1|A|A|526
3JCE|1|A|C|527
3JCE|1|A|A|528
3JCE|1|A|A|529
3JCE|1|A|G|530
3JCE|1|A|C|531
*
3JCE|1|A|G|2018
3JCE|1|A|A|2019
3JCE|1|A|A|2020
3JCE|1|A|C|2021
3JCE|1|A|U|2022
3JCE|1|A|C|2023
*
3JCE|1|A|G|2040
3JCE|1|A|U|2041
3JCE|1|A|A|2042
3JCE|1|A|C|2043
*
3JCE|1|A|G|2625
3JCE|1|A|C|2626
3JCE|1|A|G|2627
3JCE|1|A|C|2628
3JCE|1|A|U|2629
3JCE|1|A|G|2630
*
3JCE|1|A|C|2788
3JCE|1|A|C|2789
*
3JCE|1|A|G|2894
3JCE|1|A|G|2895

Current chains

Chain A

23 ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain Q

50S ribosomal protein L20

Chain S

50S ribosomal protein L22