J7_3JCN_001

3D structure

PDB id

3JCN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

3JCN|1|A|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCN|1|A|C|8
3JCN|1|A|G|9
3JCN|1|A|A|10
3JCN|1|A|C|11
3JCN|1|A|U|12
3JCN|1|A|A|13
3JCN|1|A|A|14
3JCN|1|A|G|15
*
3JCN|1|A|U|525
3JCN|1|A|A|526
3JCN|1|A|C|527
3JCN|1|A|A|528
3JCN|1|A|A|529
3JCN|1|A|G|530
3JCN|1|A|C|531
*
3JCN|1|A|G|2018
3JCN|1|A|A|2019
3JCN|1|A|A|2020
3JCN|1|A|C|2021
3JCN|1|A|U|2022
3JCN|1|A|C|2023
*
3JCN|1|A|G|2040
3JCN|1|A|U|2041
3JCN|1|A|A|2042
3JCN|1|A|C|2043
*
3JCN|1|A|G|2625
3JCN|1|A|C|2626
3JCN|1|A|G|2627
3JCN|1|A|C|2628
3JCN|1|A|U|2629
3JCN|1|A|G|2630
*
3JCN|1|A|C|2788
3JCN|1|A|C|2789
*
3JCN|1|A|G|2894
3JCN|1|A|G|2895

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain Q

50S ribosomal protein L20

Chain S

50S ribosomal protein L22