3D structure

PDB id
4CSU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structures of the 50S ribosome subunit bound with ObgE
Experimental method
ELECTRON MICROSCOPY
Resolution
5.5 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
4CSU|1|B|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4CSU|1|B|C|817
4CSU|1|B|G|818
4CSU|1|B|A|819
4CSU|1|B|A|820
4CSU|1|B|A|821
4CSU|1|B|G|822
*
4CSU|1|B|C|835
4CSU|1|B|G|836
4CSU|1|B|C|837
4CSU|1|B|C|838
*
4CSU|1|B|G|940
4CSU|1|B|A|941
4CSU|1|B|G|942
4CSU|1|B|A|943
4CSU|1|B|C|944
4CSU|1|B|A|945
4CSU|1|B|C|946
*
4CSU|1|B|G|971
4CSU|1|B|A|972
4CSU|1|B|A|973
4CSU|1|B|G|974
4CSU|1|B|A|975
4CSU|1|B|G|976
*
4CSU|1|B|C|987
4CSU|1|B|A|988
4CSU|1|B|G|989
4CSU|1|B|A|990
4CSU|1|B|C|991
*
4CSU|1|B|G|1163
4CSU|1|B|C|1164
*
4CSU|1|B|G|1185
4CSU|1|B|G|1186
4CSU|1|B|G|1187
4CSU|1|B|U|1188
4CSU|1|B|A|1189
4CSU|1|B|G|1190

Current chains

Chain B
23S RRNA

Nearby chains

Chain 2
50S RIBOSOMAL PROTEIN L30
Chain 7
50S RIBOSOMAL PROTEIN L35
Chain A
5S ribosomal RNA; 5S rRNA
Chain L
50S RIBOSOMAL PROTEIN L15
Chain Q
50S RIBOSOMAL PROTEIN L20
Chain R
50S RIBOSOMAL PROTEIN L21

Coloring options:

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