J7_4V61_002
3D structure
- PDB id
- 4V61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.4 Å
Loop
- Sequence
- CGAAAU*AGCAG*CCAGUGAG*CGAGAG*CGGAU*GG*CGGUAG
- Length
- 38 nucleotides
- Bulged bases
- 4V61|1|BA|A|973, 4V61|1|BA|A|1001
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V61|1|BA|C|828
4V61|1|BA|G|829
4V61|1|BA|A|830
4V61|1|BA|A|831
4V61|1|BA|A|832
4V61|1|BA|U|833
*
4V61|1|BA|A|846
4V61|1|BA|G|847
4V61|1|BA|C|848
4V61|1|BA|A|849
4V61|1|BA|G|850
*
4V61|1|BA|C|967
4V61|1|BA|C|968
4V61|1|BA|A|969
4V61|1|BA|G|970
4V61|1|BA|U|971
4V61|1|BA|G|972
4V61|1|BA|A|973
4V61|1|BA|G|974
*
4V61|1|BA|C|999
4V61|1|BA|G|1000
4V61|1|BA|A|1001
4V61|1|BA|G|1002
4V61|1|BA|A|1003
4V61|1|BA|G|1004
*
4V61|1|BA|C|1015
4V61|1|BA|G|1016
4V61|1|BA|G|1017
4V61|1|BA|A|1018
4V61|1|BA|U|1019
*
4V61|1|BA|G|1190
4V61|1|BA|G|1191
*
4V61|1|BA|C|1206
4V61|1|BA|G|1207
4V61|1|BA|G|1208
4V61|1|BA|U|1209
4V61|1|BA|A|1210
4V61|1|BA|G|1211
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain B5
- Ribosomal Protein L35
- Chain BB
- 5S ribosomal RNA; 5S rRNA
- Chain BN
- Ribosomal Protein L15
- Chain BS
- Ribosomal Protein L20
- Chain BT
- Ribosomal Protein L21
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