3D structure

PDB id
4V69 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Ternary complex-bound E.coli 70S ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
6.7 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
4V69|1|BB|A|945
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V69|1|BB|C|817
4V69|1|BB|G|818
4V69|1|BB|A|819
4V69|1|BB|A|820
4V69|1|BB|A|821
4V69|1|BB|G|822
*
4V69|1|BB|C|835
4V69|1|BB|G|836
4V69|1|BB|C|837
4V69|1|BB|C|838
*
4V69|1|BB|G|940
4V69|1|BB|A|941
4V69|1|BB|G|942
4V69|1|BB|A|943
4V69|1|BB|C|944
4V69|1|BB|A|945
4V69|1|BB|C|946
*
4V69|1|BB|G|971
4V69|1|BB|A|972
4V69|1|BB|A|973
4V69|1|BB|G|974
4V69|1|BB|A|975
4V69|1|BB|G|976
*
4V69|1|BB|C|987
4V69|1|BB|A|988
4V69|1|BB|G|989
4V69|1|BB|A|990
4V69|1|BB|C|991
*
4V69|1|BB|G|1163
4V69|1|BB|C|1164
*
4V69|1|BB|G|1185
4V69|1|BB|G|1186
4V69|1|BB|G|1187
4V69|1|BB|U|1188
4V69|1|BB|A|1189
4V69|1|BB|G|1190

Current chains

Chain BB
23S ribosomal RNA

Nearby chains

Chain B3
50S ribosomal protein L35
Chain BA
5S ribosomal RNA; 5S rRNA
Chain BL
50S ribosomal protein L15
Chain BQ
50S ribosomal protein L20
Chain BR
50S ribosomal protein L21
Chain BZ
50S ribosomal protein L30

Coloring options:

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