J7_4V6K_001

3D structure

PDB id

4V6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

8.25 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUCG*UGUAC*GCGCUG*CC*GG

Length

37 nucleotides

Bulged bases

4V6K|1|AB|C|2021

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6K|1|AB|C|8
4V6K|1|AB|G|9
4V6K|1|AB|A|10
4V6K|1|AB|C|11
4V6K|1|AB|U|12
4V6K|1|AB|A|13
4V6K|1|AB|A|14
4V6K|1|AB|G|15
*
4V6K|1|AB|U|525
4V6K|1|AB|A|526
4V6K|1|AB|C|527
4V6K|1|AB|A|528
4V6K|1|AB|A|529
4V6K|1|AB|G|530
4V6K|1|AB|C|531
*
4V6K|1|AB|G|2018
4V6K|1|AB|A|2019
4V6K|1|AB|A|2020
4V6K|1|AB|C|2021
4V6K|1|AB|U|2022
4V6K|1|AB|C|2023
4V6K|1|AB|G|2024
*
4V6K|1|AB|U|2039
4V6K|1|AB|G|2040
4V6K|1|AB|U|2041
4V6K|1|AB|A|2042
4V6K|1|AB|C|2043
*
4V6K|1|AB|G|2625
4V6K|1|AB|C|2626
4V6K|1|AB|G|2627
4V6K|1|AB|C|2628
4V6K|1|AB|U|2629
4V6K|1|AB|G|2630
*
4V6K|1|AB|C|2788
4V6K|1|AB|C|2789
*
4V6K|1|AB|G|2894
4V6K|1|AB|G|2895

Current chains

Chain AB

ribosomal RNA 23S

Nearby chains

Chain AE

50S ribosomal protein L3

Chain AK

50S ribosomal protein L13

Chain AR

50S ribosomal protein L20

Chain AT

50S ribosomal protein L22

Chain Ac

50S ribosomal protein L32