J7_4V6X_001
3D structure
- PDB id
- 4V6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGCUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 4V6X|1|A5|G|1854
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6X|1|A5|C|1666
4V6X|1|A5|G|1667
4V6X|1|A5|A|1668
4V6X|1|A5|A|1669
4V6X|1|A5|G|1670
4V6X|1|A5|U|1671
*
4V6X|1|A5|A|1684
4V6X|1|A5|G|1685
*
4V6X|1|A5|U|1852
4V6X|1|A5|G|1853
4V6X|1|A5|G|1854
4V6X|1|A5|G|1855
*
4V6X|1|A5|C|1879
4V6X|1|A5|G|1880
4V6X|1|A5|C|1881
4V6X|1|A5|U|1882
4V6X|1|A5|G|1883
4V6X|1|A5|C|1884
*
4V6X|1|A5|G|1895
4V6X|1|A5|A|1896
4V6X|1|A5|A|1897
4V6X|1|A5|C|1898
4V6X|1|A5|G|1899
*
4V6X|1|A5|C|2077
4V6X|1|A5|C|2078
*
4V6X|1|A5|G|2278
4V6X|1|A5|A|2279
4V6X|1|A5|G|2280
4V6X|1|A5|U|2281
4V6X|1|A5|A|2282
4V6X|1|A5|G|2283
Current chains
- Chain A5
- 28S ribosomal RNA
Nearby chains
- Chain A7
- 5S ribosomal RNA; 5S rRNA
- Chain CF
- 60S ribosomal protein L7
- Chain CL
- 60S ribosomal protein L13
- Chain CQ
- 60S ribosomal protein L18
- Chain CT
- 60S ribosomal protein L21
- Chain Ca
- 60S ribosomal protein L27a
- Chain Cb
- 60S ribosomal protein L29
- Chain Ce
- 60S ribosomal protein L32
- Chain Cf
- 60S ribosomal protein L35a
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