J7_4V6Y_001

3D structure

PDB id

4V6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

4V6Y|1|BA|G|530, 4V6Y|1|BA|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6Y|1|BA|C|8
4V6Y|1|BA|G|9
4V6Y|1|BA|A|10
4V6Y|1|BA|C|11
4V6Y|1|BA|U|12
4V6Y|1|BA|A|13
4V6Y|1|BA|A|14
4V6Y|1|BA|G|15
*
4V6Y|1|BA|U|525
4V6Y|1|BA|A|526
4V6Y|1|BA|C|527
4V6Y|1|BA|A|528
4V6Y|1|BA|A|529
4V6Y|1|BA|G|530
4V6Y|1|BA|C|531
*
4V6Y|1|BA|G|2018
4V6Y|1|BA|A|2019
4V6Y|1|BA|A|2020
4V6Y|1|BA|C|2021
4V6Y|1|BA|U|2022
4V6Y|1|BA|C|2023
*
4V6Y|1|BA|G|2040
4V6Y|1|BA|U|2041
4V6Y|1|BA|A|2042
4V6Y|1|BA|C|2043
*
4V6Y|1|BA|G|2625
4V6Y|1|BA|C|2626
4V6Y|1|BA|G|2627
4V6Y|1|BA|C|2628
4V6Y|1|BA|U|2629
4V6Y|1|BA|G|2630
*
4V6Y|1|BA|C|2788
4V6Y|1|BA|C|2789
*
4V6Y|1|BA|G|2894
4V6Y|1|BA|G|2895

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B0

50S ribosomal protein L29

Chain BD

50S ribosomal protein L36

Chain BJ

50S ribosomal protein L9

Chain BQ

50S ribosomal protein L18

Chain BS

50S ribosomal protein L20