3D structure

PDB id
4V72 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)
Experimental method
ELECTRON MICROSCOPY
Resolution
13 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
4V72|1|BA|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V72|1|BA|C|817
4V72|1|BA|G|818
4V72|1|BA|A|819
4V72|1|BA|A|820
4V72|1|BA|A|821
4V72|1|BA|G|822
*
4V72|1|BA|C|835
4V72|1|BA|G|836
4V72|1|BA|C|837
4V72|1|BA|C|838
*
4V72|1|BA|G|940
4V72|1|BA|A|941
4V72|1|BA|G|942
4V72|1|BA|A|943
4V72|1|BA|C|944
4V72|1|BA|A|945
4V72|1|BA|C|946
*
4V72|1|BA|G|971
4V72|1|BA|A|972
4V72|1|BA|A|973
4V72|1|BA|G|974
4V72|1|BA|A|975
4V72|1|BA|G|976
*
4V72|1|BA|C|987
4V72|1|BA|A|988
4V72|1|BA|G|989
4V72|1|BA|A|990
4V72|1|BA|C|991
*
4V72|1|BA|G|1163
4V72|1|BA|C|1164
*
4V72|1|BA|G|1185
4V72|1|BA|G|1186
4V72|1|BA|G|1187
4V72|1|BA|U|1188
4V72|1|BA|A|1189
4V72|1|BA|G|1190

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B3
50S ribosomal protein L35
Chain BB
5S ribosomal RNA; 5S rRNA
Chain BL
50S ribosomal protein L15
Chain BQ
50S ribosomal protein L20
Chain BR
50S ribosomal protein L21
Chain BZ
50S ribosomal protein L30

Coloring options:

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