3D structure

PDB id
4V77 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
4V77|1|BA|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V77|1|BA|C|817
4V77|1|BA|G|818
4V77|1|BA|A|819
4V77|1|BA|A|820
4V77|1|BA|A|821
4V77|1|BA|G|822
*
4V77|1|BA|C|835
4V77|1|BA|G|836
4V77|1|BA|C|837
4V77|1|BA|C|838
*
4V77|1|BA|G|940
4V77|1|BA|A|941
4V77|1|BA|G|942
4V77|1|BA|A|943
4V77|1|BA|C|944
4V77|1|BA|A|945
4V77|1|BA|C|946
*
4V77|1|BA|G|971
4V77|1|BA|A|972
4V77|1|BA|A|973
4V77|1|BA|G|974
4V77|1|BA|A|975
4V77|1|BA|G|976
*
4V77|1|BA|C|987
4V77|1|BA|A|988
4V77|1|BA|G|989
4V77|1|BA|A|990
4V77|1|BA|C|991
*
4V77|1|BA|G|1163
4V77|1|BA|C|1164
*
4V77|1|BA|G|1185
4V77|1|BA|G|1186
4V77|1|BA|G|1187
4V77|1|BA|U|1188
4V77|1|BA|A|1189
4V77|1|BA|G|1190

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B3
50S ribosomal protein L35
Chain BB
5S ribosomal RNA; 5S rRNA
Chain BL
50S ribosomal protein L15
Chain BQ
50S ribosomal protein L20
Chain BR
50S ribosomal protein L21
Chain BZ
50S ribosomal protein L30

Coloring options:

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