J7_4V78_001

3D structure

PDB id

4V78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

4V78|1|BA|C|527, 4V78|1|BA|G|530, 4V78|1|BA|C|2021, 4V78|1|BA|U|2022

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V78|1|BA|C|8
4V78|1|BA|G|9
4V78|1|BA|A|10
4V78|1|BA|C|11
4V78|1|BA|U|12
4V78|1|BA|A|13
4V78|1|BA|A|14
4V78|1|BA|G|15
*
4V78|1|BA|U|525
4V78|1|BA|A|526
4V78|1|BA|C|527
4V78|1|BA|A|528
4V78|1|BA|A|529
4V78|1|BA|G|530
4V78|1|BA|C|531
*
4V78|1|BA|G|2018
4V78|1|BA|A|2019
4V78|1|BA|A|2020
4V78|1|BA|C|2021
4V78|1|BA|U|2022
4V78|1|BA|C|2023
*
4V78|1|BA|G|2040
4V78|1|BA|U|2041
4V78|1|BA|A|2042
4V78|1|BA|C|2043
*
4V78|1|BA|G|2625
4V78|1|BA|C|2626
4V78|1|BA|G|2627
4V78|1|BA|C|2628
4V78|1|BA|U|2629
4V78|1|BA|G|2630
*
4V78|1|BA|C|2788
4V78|1|BA|C|2789
*
4V78|1|BA|G|2894
4V78|1|BA|G|2895

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B0

50S ribosomal protein L32

Chain BD

50S ribosomal protein L3

Chain BJ

50S ribosomal protein L13

Chain BQ

50S ribosomal protein L20

Chain BS

50S ribosomal protein L22