J7_4V78_002

3D structure

PDB id

4V78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG

Length

36 nucleotides

Bulged bases

4V78|1|BA|A|945

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V78|1|BA|C|817
4V78|1|BA|G|818
4V78|1|BA|A|819
4V78|1|BA|A|820
4V78|1|BA|A|821
4V78|1|BA|G|822
*
4V78|1|BA|C|835
4V78|1|BA|G|836
4V78|1|BA|C|837
4V78|1|BA|C|838
*
4V78|1|BA|G|940
4V78|1|BA|A|941
4V78|1|BA|G|942
4V78|1|BA|A|943
4V78|1|BA|C|944
4V78|1|BA|A|945
4V78|1|BA|C|946
*
4V78|1|BA|G|971
4V78|1|BA|A|972
4V78|1|BA|A|973
4V78|1|BA|G|974
4V78|1|BA|A|975
4V78|1|BA|G|976
*
4V78|1|BA|C|987
4V78|1|BA|A|988
4V78|1|BA|G|989
4V78|1|BA|A|990
4V78|1|BA|C|991
*
4V78|1|BA|G|1163
4V78|1|BA|C|1164
*
4V78|1|BA|G|1185
4V78|1|BA|G|1186
4V78|1|BA|G|1187
4V78|1|BA|U|1188
4V78|1|BA|A|1189
4V78|1|BA|G|1190

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BL

50S ribosomal protein L15

Chain BQ

50S ribosomal protein L20

Chain BR

50S ribosomal protein L21

Chain BZ

50S ribosomal protein L30