3D structure

PDB id
4V7B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Visualization of two tRNAs trapped in transit during EF-G-mediated translocation
Experimental method
ELECTRON MICROSCOPY
Resolution
6.8 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
4V7B|1|BA|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7B|1|BA|C|817
4V7B|1|BA|G|818
4V7B|1|BA|A|819
4V7B|1|BA|A|820
4V7B|1|BA|A|821
4V7B|1|BA|G|822
*
4V7B|1|BA|C|835
4V7B|1|BA|G|836
4V7B|1|BA|C|837
*
4V7B|1|BA|G|942
4V7B|1|BA|A|943
4V7B|1|BA|C|944
4V7B|1|BA|A|945
4V7B|1|BA|C|946
*
4V7B|1|BA|G|971
4V7B|1|BA|A|972
4V7B|1|BA|A|973
4V7B|1|BA|G|974
4V7B|1|BA|A|975
4V7B|1|BA|G|976
*
4V7B|1|BA|C|987
4V7B|1|BA|A|988
4V7B|1|BA|G|989
4V7B|1|BA|A|990
4V7B|1|BA|C|991
*
4V7B|1|BA|G|1163
4V7B|1|BA|C|1164
*
4V7B|1|BA|G|1185
4V7B|1|BA|G|1186
4V7B|1|BA|G|1187
4V7B|1|BA|U|1188
4V7B|1|BA|A|1189
4V7B|1|BA|G|1190

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B3
50S ribosomal protein L35
Chain BB
5S ribosomal RNA; 5S rRNA
Chain BL
50S ribosomal protein L15
Chain BQ
50S ribosomal protein L20
Chain BR
50S ribosomal protein L21
Chain BZ
50S ribosomal protein L30

Coloring options:

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