J7_4V7D_002

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG

Length

36 nucleotides

Bulged bases

4V7D|1|AA|A|945

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7D|1|AA|C|817
4V7D|1|AA|G|818
4V7D|1|AA|A|819
4V7D|1|AA|A|820
4V7D|1|AA|A|821
4V7D|1|AA|G|822
*
4V7D|1|AA|C|835
4V7D|1|AA|G|836
4V7D|1|AA|C|837
4V7D|1|AA|C|838
*
4V7D|1|AA|G|940
4V7D|1|AA|A|941
4V7D|1|AA|G|942
4V7D|1|AA|A|943
4V7D|1|AA|C|944
4V7D|1|AA|A|945
4V7D|1|AA|C|946
*
4V7D|1|AA|G|971
4V7D|1|AA|A|972
4V7D|1|AA|A|973
4V7D|1|AA|G|974
4V7D|1|AA|A|975
4V7D|1|AA|G|976
*
4V7D|1|AA|C|987
4V7D|1|AA|A|988
4V7D|1|AA|G|989
4V7D|1|AA|A|990
4V7D|1|AA|C|991
*
4V7D|1|AA|G|1163
4V7D|1|AA|C|1164
*
4V7D|1|AA|G|1185
4V7D|1|AA|G|1186
4V7D|1|AA|G|1187
4V7D|1|AA|U|1188
4V7D|1|AA|A|1189
4V7D|1|AA|G|1190

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain A3

50S ribosomal protein L30

Chain A7

50S ribosomal protein L35

Chain AB

5S ribosomal RNA; 5S rRNA

Chain AO

50S ribosomal protein L15

Chain AT

50S ribosomal protein L20

Chain AU

50S ribosomal protein L21