J7_4V7R_001
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- CGAAGU*AGC*GUGGG*CGAUGC*GAACG*CC*GAGUAG
- Length
- 33 nucleotides
- Bulged bases
- 4V7R|1|B1|G|1116
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V7R|1|B1|C|949
4V7R|1|B1|G|950
4V7R|1|B1|A|951
4V7R|1|B1|A|952
4V7R|1|B1|G|953
4V7R|1|B1|U|954
*
4V7R|1|B1|A|967
4V7R|1|B1|G|968
4V7R|1|B1|C|969
*
4V7R|1|B1|G|1113
4V7R|1|B1|U|1114
4V7R|1|B1|G|1115
4V7R|1|B1|G|1116
4V7R|1|B1|G|1117
*
4V7R|1|B1|C|1141
4V7R|1|B1|G|1142
4V7R|1|B1|A|1143
4V7R|1|B1|U|1144
4V7R|1|B1|G|1145
4V7R|1|B1|C|1146
*
4V7R|1|B1|G|1157
4V7R|1|B1|A|1158
4V7R|1|B1|A|1159
4V7R|1|B1|C|1160
4V7R|1|B1|G|1161
*
4V7R|1|B1|C|1338
4V7R|1|B1|C|1339
*
4V7R|1|B1|G|1365
4V7R|1|B1|A|1366
4V7R|1|B1|G|1367
4V7R|1|B1|U|1368
4V7R|1|B1|A|1369
4V7R|1|B1|G|1370
Current chains
- Chain B1
- 25S ribosomal RNA
Nearby chains
- Chain B2
- 5S ribosomal RNA; 5S rRNA
- Chain BG
- 60S ribosomal protein L7-A
- Chain BT
- 60S ribosomal protein L21-A
- Chain BY
- 60S ribosomal protein L28
- Chain Bb
- 60S ribosomal protein L32
Coloring options: