J7_4V91_001
3D structure
- PDB id
- 4V91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGAUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 4V91|1|1|G|1115, 4V91|1|1|G|1116
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V91|1|1|C|949
4V91|1|1|G|950
4V91|1|1|A|951
4V91|1|1|A|952
4V91|1|1|G|953
4V91|1|1|U|954
*
4V91|1|1|A|967
4V91|1|1|G|968
*
4V91|1|1|U|1114
4V91|1|1|G|1115
4V91|1|1|G|1116
4V91|1|1|G|1117
*
4V91|1|1|C|1141
4V91|1|1|G|1142
4V91|1|1|A|1143
4V91|1|1|U|1144
4V91|1|1|G|1145
4V91|1|1|C|1146
*
4V91|1|1|G|1157
4V91|1|1|A|1158
4V91|1|1|A|1159
4V91|1|1|C|1160
4V91|1|1|G|1161
*
4V91|1|1|C|1338
4V91|1|1|C|1339
*
4V91|1|1|G|1365
4V91|1|1|A|1366
4V91|1|1|G|1367
4V91|1|1|U|1368
4V91|1|1|A|1369
4V91|1|1|G|1370
Current chains
- Chain 1
- 25S RRNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain C
- UL4
- Chain F
- UL30
- Chain L
- EL13
- Chain Q
- EL18
- Chain T
- EL21
- Chain a
- UL15
- Chain b
- EL29
- Chain e
- EL32
- Chain f
- EL33
Coloring options: