J7_4V9C_001

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

4V9C|1|BA|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9C|1|BA|C|8
4V9C|1|BA|G|9
4V9C|1|BA|A|10
4V9C|1|BA|C|11
4V9C|1|BA|U|12
4V9C|1|BA|A|13
4V9C|1|BA|A|14
4V9C|1|BA|G|15
*
4V9C|1|BA|U|525
4V9C|1|BA|A|526
4V9C|1|BA|C|527
4V9C|1|BA|A|528
4V9C|1|BA|A|529
4V9C|1|BA|G|530
4V9C|1|BA|C|531
*
4V9C|1|BA|G|2018
4V9C|1|BA|A|2019
4V9C|1|BA|A|2020
4V9C|1|BA|C|2021
4V9C|1|BA|U|2022
4V9C|1|BA|C|2023
*
4V9C|1|BA|G|2040
4V9C|1|BA|U|2041
4V9C|1|BA|A|2042
4V9C|1|BA|C|2043
*
4V9C|1|BA|G|2625
4V9C|1|BA|C|2626
4V9C|1|BA|G|2627
4V9C|1|BA|C|2628
4V9C|1|BA|U|2629
4V9C|1|BA|G|2630
*
4V9C|1|BA|C|2788
4V9C|1|BA|C|2789
*
4V9C|1|BA|G|2894
4V9C|1|BA|G|2895

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B0

50S ribosomal protein L32

Chain BD

50S ribosomal protein L3

Chain BJ

50S ribosomal protein L13

Chain BQ

50S ribosomal protein L20

Chain BS

50S ribosomal protein L22