J7_4WQY_001

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU

Length

35 nucleotides

Bulged bases

4WQY|1|AA|G|555, 4WQY|1|AA|C|2043

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQY|1|AA|A|8
4WQY|1|AA|U|9
4WQY|1|AA|G|10
4WQY|1|AA|G|11
4WQY|1|AA|U|12
4WQY|1|AA|A|13
4WQY|1|AA|A|14
4WQY|1|AA|G|15
*
4WQY|1|AA|U|550
4WQY|1|AA|A|551
4WQY|1|AA|C|552
4WQY|1|AA|A|553
4WQY|1|AA|A|554
4WQY|1|AA|G|555
4WQY|1|AA|C|556
*
4WQY|1|AA|G|2040
4WQY|1|AA|A|2041
4WQY|1|AA|A|2042
4WQY|1|AA|C|2043
4WQY|1|AA|U|2044
4WQY|1|AA|G|2045
*
4WQY|1|AA|C|2062
4WQY|1|AA|U|2063
4WQY|1|AA|A|2064
4WQY|1|AA|C|2065
*
4WQY|1|AA|G|2637
4WQY|1|AA|C|2638
4WQY|1|AA|G|2639
4WQY|1|AA|C|2640
4WQY|1|AA|A|2641
4WQY|1|AA|G|2642
*
4WQY|1|AA|C|2801
4WQY|1|AA|C|2802
*
4WQY|1|AA|G|2903
4WQY|1|AA|U|2904

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain A5

50S ribosomal protein L32

Chain AE

50S ribosomal protein L3

Chain AN

50S ribosomal protein L13

Chain AU

50S ribosomal protein L20

Chain AW

50S ribosomal protein L22