J7_4WQY_002

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG

Length

32 nucleotides

Bulged bases

4WQY|1|AA|A|990, 4WQY|1|AA|C|1020

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQY|1|AA|C|864
4WQY|1|AA|G|865
4WQY|1|AA|A|866
4WQY|1|AA|A|867
4WQY|1|AA|A|868
4WQY|1|AA|U|869
*
4WQY|1|AA|A|882
4WQY|1|AA|G|883
*
4WQY|1|AA|U|988
4WQY|1|AA|G|989
4WQY|1|AA|A|990
4WQY|1|AA|G|991
*
4WQY|1|AA|C|1016
4WQY|1|AA|G|1017
4WQY|1|AA|A|1018
4WQY|1|AA|G|1019
4WQY|1|AA|C|1020
4WQY|1|AA|G|1021
4WQY|1|AA|C|1022
*
4WQY|1|AA|G|1033
4WQY|1|AA|A|1034
4WQY|1|AA|G|1035
4WQY|1|AA|A|1036
4WQY|1|AA|C|1037
*
4WQY|1|AA|G|1209
4WQY|1|AA|G|1210
*
4WQY|1|AA|C|1230
4WQY|1|AA|G|1231
4WQY|1|AA|G|1232
4WQY|1|AA|U|1233
4WQY|1|AA|A|1234
4WQY|1|AA|G|1235

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain A3

50S ribosomal protein L30

Chain A8

50S ribosomal protein L35

Chain AB

5S ribosomal RNA; 5S rRNA

Chain AP

50S ribosomal protein L15

Chain AU

50S ribosomal protein L20

Chain AV

50S ribosomal protein L21