J7_4WQY_003

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU

Length

35 nucleotides

Bulged bases

4WQY|1|CA|G|530, 4WQY|1|CA|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQY|1|CA|A|8
4WQY|1|CA|U|9
4WQY|1|CA|G|10
4WQY|1|CA|G|11
4WQY|1|CA|U|12
4WQY|1|CA|A|13
4WQY|1|CA|A|14
4WQY|1|CA|G|15
*
4WQY|1|CA|U|525
4WQY|1|CA|A|526
4WQY|1|CA|C|527
4WQY|1|CA|A|528
4WQY|1|CA|A|529
4WQY|1|CA|G|530
4WQY|1|CA|C|531
*
4WQY|1|CA|G|2018
4WQY|1|CA|A|2019
4WQY|1|CA|A|2020
4WQY|1|CA|C|2021
4WQY|1|CA|U|2022
4WQY|1|CA|G|2023
*
4WQY|1|CA|C|2040
4WQY|1|CA|U|2041
4WQY|1|CA|A|2042
4WQY|1|CA|C|2043
*
4WQY|1|CA|G|2625
4WQY|1|CA|C|2626
4WQY|1|CA|G|2627
4WQY|1|CA|C|2628
4WQY|1|CA|A|2629
4WQY|1|CA|G|2630
*
4WQY|1|CA|C|2788
4WQY|1|CA|C|2789
*
4WQY|1|CA|G|2894
4WQY|1|CA|U|2895

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C5

50S ribosomal protein L32

Chain CE

50S ribosomal protein L3

Chain CN

50S ribosomal protein L13

Chain CU

50S ribosomal protein L20

Chain CW

50S ribosomal protein L22