J7_4WQY_004

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG

Length

32 nucleotides

Bulged bases

4WQY|1|CA|A|945, 4WQY|1|CA|C|975

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQY|1|CA|C|817
4WQY|1|CA|G|818
4WQY|1|CA|A|819
4WQY|1|CA|A|820
4WQY|1|CA|A|821
4WQY|1|CA|U|822
*
4WQY|1|CA|A|835
4WQY|1|CA|G|836
*
4WQY|1|CA|U|943
4WQY|1|CA|G|944
4WQY|1|CA|A|945
4WQY|1|CA|G|946
*
4WQY|1|CA|C|971
4WQY|1|CA|G|972
4WQY|1|CA|A|973
4WQY|1|CA|G|974
4WQY|1|CA|C|975
4WQY|1|CA|G|975|||A
4WQY|1|CA|C|976
*
4WQY|1|CA|G|987
4WQY|1|CA|A|988
4WQY|1|CA|G|989
4WQY|1|CA|A|990
4WQY|1|CA|C|991
*
4WQY|1|CA|G|1163
4WQY|1|CA|G|1164
*
4WQY|1|CA|C|1185
4WQY|1|CA|G|1186
4WQY|1|CA|G|1187
4WQY|1|CA|U|1188
4WQY|1|CA|A|1189
4WQY|1|CA|G|1190

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C3

50S ribosomal protein L30

Chain C8

50S ribosomal protein L35

Chain CB

5S ribosomal RNA; 5S rRNA

Chain CP

50S ribosomal protein L15

Chain CU

50S ribosomal protein L20

Chain CV

50S ribosomal protein L21