J7_5MMI_001
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AACGAGGAAAG*UCUCAAGC*GACAUG*CUAC*GCGUUA*UC*GACU
- Length
- 41 nucleotides
- Bulged bases
- 5MMI|1|A|G|541, 5MMI|1|A|A|2035
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5MMI|1|A|A|5
5MMI|1|A|A|6
5MMI|1|A|C|7
5MMI|1|A|G|8
5MMI|1|A|A|9
5MMI|1|A|G|10
5MMI|1|A|G|11
5MMI|1|A|A|12
5MMI|1|A|A|13
5MMI|1|A|A|14
5MMI|1|A|G|15
*
5MMI|1|A|U|535
5MMI|1|A|C|536
5MMI|1|A|U|537
5MMI|1|A|C|538
5MMI|1|A|A|539
5MMI|1|A|A|540
5MMI|1|A|G|541
5MMI|1|A|C|542
*
5MMI|1|A|G|2032
5MMI|1|A|A|2033
5MMI|1|A|C|2034
5MMI|1|A|A|2035
5MMI|1|A|U|2036
5MMI|1|A|G|2037
*
5MMI|1|A|C|2054
5MMI|1|A|U|2055
5MMI|1|A|A|2056
5MMI|1|A|C|2057
*
5MMI|1|A|G|2642
5MMI|1|A|C|2643
5MMI|1|A|G|2644
5MMI|1|A|U|2645
5MMI|1|A|U|2646
5MMI|1|A|A|2647
*
5MMI|1|A|U|2806
5MMI|1|A|C|2807
*
5MMI|1|W|G|98
5MMI|1|W|A|99
5MMI|1|W|C|100
5MMI|1|W|U|101
Current chains
- Chain A
- 23S ribosomal RNA
- Chain W
- 4.5S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L32, chloroplastic
- Chain D
- plastid ribosomal protein uL3c
- Chain K
- 50S ribosomal protein L13, chloroplastic
- Chain R
- 50S ribosomal protein L20, chloroplastic
- Chain S
- 50S ribosomal protein L21, chloroplastic
- Chain T
- 50S ribosomal protein L22, chloroplastic
Coloring options: