J7_5NJT_001
3D structure
- PDB id
- 5NJT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UUAGAAAG*UACAAGU*AUAGUA*UUAC*GCGCAG*CC*GA
- Length
- 35 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5NJT|1|U|U|8
5NJT|1|U|U|9
5NJT|1|U|A|10
5NJT|1|U|G|11
5NJT|1|U|A|12
5NJT|1|U|A|13
5NJT|1|U|A|14
5NJT|1|U|G|15
*
5NJT|1|U|U|571
5NJT|1|U|A|572
5NJT|1|U|C|573
5NJT|1|U|A|574
5NJT|1|U|A|575
5NJT|1|U|G|576
5NJT|1|U|U|577
*
5NJT|1|U|A|2047
5NJT|1|U|U|2048
5NJT|1|U|A|2049
5NJT|1|U|G|2050
5NJT|1|U|U|2051
5NJT|1|U|A|2052
*
5NJT|1|U|U|2069
5NJT|1|U|U|2070
5NJT|1|U|A|2071
5NJT|1|U|C|2072
*
5NJT|1|U|G|2654
5NJT|1|U|C|2655
5NJT|1|U|G|2656
5NJT|1|U|C|2657
5NJT|1|U|A|2658
5NJT|1|U|G|2659
*
5NJT|1|U|C|2817
5NJT|1|U|C|2818
*
5NJT|1|U|G|2918
5NJT|1|U|A|2919
Current chains
- Chain U
- 23S ribosomal RNA
Nearby chains
- Chain X
- 50S ribosomal protein L3
- Chain c
- 50S ribosomal protein L13
- Chain j
- 50S ribosomal protein L20
- Chain l
- 50S ribosomal protein L22
- Chain p
- 50S ribosomal protein L32
Coloring options: