J7_5NP6_002
3D structure
- PDB id
- 5NP6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S structure prior to bypassing
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 5NP6|1|Y|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5NP6|1|Y|C|817
5NP6|1|Y|G|818
5NP6|1|Y|A|819
5NP6|1|Y|A|820
5NP6|1|Y|A|821
5NP6|1|Y|G|822
*
5NP6|1|Y|C|835
5NP6|1|Y|G|836
5NP6|1|Y|C|837
5NP6|1|Y|C|838
*
5NP6|1|Y|G|940
5NP6|1|Y|A|941
5NP6|1|Y|G|942
5NP6|1|Y|A|943
5NP6|1|Y|C|944
5NP6|1|Y|A|945
5NP6|1|Y|C|946
*
5NP6|1|Y|G|971
5NP6|1|Y|A|972
5NP6|1|Y|A|973
5NP6|1|Y|G|974
5NP6|1|Y|A|975
5NP6|1|Y|G|976
*
5NP6|1|Y|C|987
5NP6|1|Y|A|988
5NP6|1|Y|G|989
5NP6|1|Y|A|990
5NP6|1|Y|C|991
*
5NP6|1|Y|G|1163
5NP6|1|Y|C|1164
*
5NP6|1|Y|G|1185
5NP6|1|Y|G|1186
5NP6|1|Y|G|1187
5NP6|1|Y|U|1188
5NP6|1|Y|A|1189
5NP6|1|Y|G|1190
Current chains
- Chain Y
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L35
- Chain Z
- 5S ribosomal RNA; 5S rRNA
- Chain j
- 50S ribosomal protein L15
- Chain o
- 50S ribosomal protein L20
- Chain p
- 50S ribosomal protein L21
- Chain x
- 50S ribosomal protein L30
Coloring options: