J7_5OT7_001
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG
- Length
- 32 nucleotides
- Bulged bases
- 5OT7|1|4|G|944, 5OT7|1|4|A|945, 5OT7|1|4|C|975
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5OT7|1|4|C|817
5OT7|1|4|G|818
5OT7|1|4|A|819
5OT7|1|4|A|820
5OT7|1|4|A|821
5OT7|1|4|U|822
*
5OT7|1|4|A|835
5OT7|1|4|G|836
*
5OT7|1|4|U|943
5OT7|1|4|G|944
5OT7|1|4|A|945
5OT7|1|4|G|946
*
5OT7|1|4|C|971
5OT7|1|4|G|972
5OT7|1|4|A|973
5OT7|1|4|G|974
5OT7|1|4|C|975
5OT7|1|4|G|975|||A
5OT7|1|4|C|976
*
5OT7|1|4|G|987
5OT7|1|4|A|988
5OT7|1|4|G|989
5OT7|1|4|A|990
5OT7|1|4|C|991
*
5OT7|1|4|G|1163
5OT7|1|4|G|1164
*
5OT7|1|4|C|1185
5OT7|1|4|G|1186
5OT7|1|4|G|1187
5OT7|1|4|U|1188
5OT7|1|4|A|1189
5OT7|1|4|G|1190
Current chains
- Chain 4
- 23S Ribosomal RNA
Nearby chains
- Chain 5
- 5S ribosomal RNA; 5S rRNA
- Chain Y
- 50S ribosomal protein L30
- Chain d
- 50S ribosomal protein L35
- Chain q
- 50S ribosomal protein L15
- Chain v
- 50S ribosomal protein L20
- Chain w
- 50S ribosomal protein L21
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