J7_5T2C_001
3D structure
- PDB id
- 5T2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human ribosome at 3.6 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAAGU*AGCUG*CUAGUGGG*CGCUGC*GAACG*CC*GAGUAG
- Length
- 38 nucleotides
- Bulged bases
- 5T2C|1|A|G|1854
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2C|1|A|C|1666
5T2C|1|A|G|1667
5T2C|1|A|A|1668
5T2C|1|A|A|1669
5T2C|1|A|G|1670
5T2C|1|A|U|1671
*
5T2C|1|A|A|1684
5T2C|1|A|G|1685
5T2C|1|A|C|1686
5T2C|1|A|U|1687
5T2C|1|A|G|1688
*
5T2C|1|A|C|1848
5T2C|1|A|U|1849
5T2C|1|A|A|1850
5T2C|1|A|G|1851
5T2C|1|A|U|1852
5T2C|1|A|G|1853
5T2C|1|A|G|1854
5T2C|1|A|G|1855
*
5T2C|1|A|C|1879
5T2C|1|A|G|1880
5T2C|1|A|C|1881
5T2C|1|A|U|1882
5T2C|1|A|G|1883
5T2C|1|A|C|1884
*
5T2C|1|A|G|1895
5T2C|1|A|A|1896
5T2C|1|A|A|1897
5T2C|1|A|C|1898
5T2C|1|A|G|1899
*
5T2C|1|A|C|2077
5T2C|1|A|C|2078
*
5T2C|1|A|G|2278
5T2C|1|A|A|2279
5T2C|1|A|G|2280
5T2C|1|A|U|2281
5T2C|1|A|A|2282
5T2C|1|A|G|2283
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 60S ribosomal protein L4
- Chain K
- 60S ribosomal protein L18
- Chain N
- 60S ribosomal protein L21
- Chain U
- 60S ribosomal protein L27a
- Chain V
- 60S ribosomal protein L29
- Chain Y
- 60S ribosomal protein L32
- Chain Z
- 60S ribosomal protein L35a
- Chain m
- 60S ribosomal protein L7
- Chain r
- 60S ribosomal protein L13
Coloring options: