J7_5T2C_002
3D structure
- PDB id
- 5T2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human ribosome at 3.6 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAUGCAUGUCUAAG*CUGCGAAUGGCUCAUUAAAUC*GCCC*GGUGAC*GGAGAG*CACAU*AGGCAGCAG
- Length
- 65 nucleotides
- Bulged bases
- 5T2C|1|AA|U|55, 5T2C|1|AA|G|407
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2C|1|AA|C|49
5T2C|1|AA|A|50
5T2C|1|AA|U|51
5T2C|1|AA|G|52
5T2C|1|AA|C|53
5T2C|1|AA|A|54
5T2C|1|AA|U|55
5T2C|1|AA|G|56
5T2C|1|AA|U|57
5T2C|1|AA|C|58
5T2C|1|AA|U|59
5T2C|1|AA|A|60
5T2C|1|AA|A|61
5T2C|1|AA|G|62
*
5T2C|1|AA|C|86
5T2C|1|AA|U|87
5T2C|1|AA|G|88
5T2C|1|AA|C|89
5T2C|1|AA|G|90
5T2C|1|AA|A|91
5T2C|1|AA|A|92
5T2C|1|AA|U|93
5T2C|1|AA|G|94
5T2C|1|AA|G|95
5T2C|1|AA|C|96
5T2C|1|AA|U|97
5T2C|1|AA|C|98
5T2C|1|AA|A|99
5T2C|1|AA|U|100
5T2C|1|AA|U|101
5T2C|1|AA|A|102
5T2C|1|AA|A|103
5T2C|1|AA|A|104
5T2C|1|AA|U|105
5T2C|1|AA|C|106
*
5T2C|1|AA|G|355
5T2C|1|AA|C|356
5T2C|1|AA|C|357
5T2C|1|AA|C|358
*
5T2C|1|AA|G|404
5T2C|1|AA|G|405
5T2C|1|AA|U|406
5T2C|1|AA|G|407
5T2C|1|AA|A|408
5T2C|1|AA|C|409
*
5T2C|1|AA|G|431
5T2C|1|AA|G|432
5T2C|1|AA|A|433
5T2C|1|AA|G|434
5T2C|1|AA|A|435
5T2C|1|AA|G|436
*
5T2C|1|AA|C|457
5T2C|1|AA|A|458
5T2C|1|AA|C|459
5T2C|1|AA|A|460
5T2C|1|AA|U|461
*
5T2C|1|AA|A|469
5T2C|1|AA|G|470
5T2C|1|AA|G|471
5T2C|1|AA|C|472
5T2C|1|AA|A|473
5T2C|1|AA|G|474
5T2C|1|AA|C|475
5T2C|1|AA|A|476
5T2C|1|AA|G|477
Current chains
- Chain AA
- 18S rRNA
Nearby chains
- Chain AD
- 40S ribosomal protein S23
- Chain AK
- 40S ribosomal protein S6
- Chain AL
- 40S ribosomal protein S9
- Chain AQ
- 40S ribosomal protein S24
- Chain Ar
- 40S ribosomal protein S4, X isoform
- Chain Au
- 40S ribosomal protein S8
- Chain Aw
- 40S ribosomal protein S11
- Chain P
- 60S ribosomal protein L23
Coloring options: