J7_5TCU_003
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UUAUUAAG*UACAAGU*AUAGUA*UUAC*GCGUAG*CC*GA
- Length
- 35 nucleotides
- Bulged bases
- 5TCU|1|B|U|12, 5TCU|1|B|G|575, 5TCU|1|B|G|2048
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5TCU|1|B|U|8
5TCU|1|B|U|9
5TCU|1|B|A|10
5TCU|1|B|U|11
5TCU|1|B|U|12
5TCU|1|B|A|13
5TCU|1|B|A|14
5TCU|1|B|G|15
*
5TCU|1|B|U|570
5TCU|1|B|A|571
5TCU|1|B|C|572
5TCU|1|B|A|573
5TCU|1|B|A|574
5TCU|1|B|G|575
5TCU|1|B|U|576
*
5TCU|1|B|A|2045
5TCU|1|B|U|2046
5TCU|1|B|A|2047
5TCU|1|B|G|2048
5TCU|1|B|U|2049
5TCU|1|B|A|2050
*
5TCU|1|B|U|2067
5TCU|1|B|U|2068
5TCU|1|B|A|2069
5TCU|1|B|C|2070
*
5TCU|1|B|G|2652
5TCU|1|B|C|2653
5TCU|1|B|G|2654
5TCU|1|B|U|2655
5TCU|1|B|A|2656
5TCU|1|B|G|2657
*
5TCU|1|B|C|2815
5TCU|1|B|C|2816
*
5TCU|1|B|G|2913
5TCU|1|B|A|2914
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain L3
- 50S ribosomal protein L20
- Chain L5
- 50S ribosomal protein L22
- Chain LC
- 50S ribosomal protein L3
- Chain LE
- 50S ribosomal protein L32
- Chain LM
- 50S ribosomal protein L13
Coloring options: