J7_5V7Q_001
3D structure
- PDB id
- 5V7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CCGAAAU*AG*UGAG*CGAAAG*CAGAU*GC*GGGUAGG
- Length
- 33 nucleotides
- Bulged bases
- 5V7Q|1|A|A|1073
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5V7Q|1|A|C|945
5V7Q|1|A|C|946
5V7Q|1|A|G|947
5V7Q|1|A|A|948
5V7Q|1|A|A|949
5V7Q|1|A|A|950
5V7Q|1|A|U|951
*
5V7Q|1|A|A|964
5V7Q|1|A|G|965
*
5V7Q|1|A|U|1071
5V7Q|1|A|G|1072
5V7Q|1|A|A|1073
5V7Q|1|A|G|1074
*
5V7Q|1|A|C|1100
5V7Q|1|A|G|1101
5V7Q|1|A|A|1102
5V7Q|1|A|A|1103
5V7Q|1|A|A|1104
5V7Q|1|A|G|1105
*
5V7Q|1|A|C|1116
5V7Q|1|A|A|1117
5V7Q|1|A|G|1118
5V7Q|1|A|A|1119
5V7Q|1|A|U|1120
*
5V7Q|1|A|G|1293
5V7Q|1|A|C|1294
*
5V7Q|1|A|G|1317
5V7Q|1|A|G|1318
5V7Q|1|A|G|1319
5V7Q|1|A|U|1320
5V7Q|1|A|A|1321
5V7Q|1|A|G|1322
5V7Q|1|A|G|1323
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L35
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain L
- 50S ribosomal protein L15
- Chain Q
- 50S ribosomal protein L20
- Chain R
- LSU ribosomal protein L21p
- Chain Z
- 50S ribosomal protein L30
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