J7_6B4V_001
3D structure
- PDB id
- 6B4V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU
- Length
- 35 nucleotides
- Bulged bases
- 6B4V|1|B|G|530, 6B4V|1|B|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6B4V|1|B|A|8
6B4V|1|B|U|9
6B4V|1|B|G|10
6B4V|1|B|G|11
6B4V|1|B|U|12
6B4V|1|B|A|13
6B4V|1|B|A|14
6B4V|1|B|G|15
*
6B4V|1|B|U|525
6B4V|1|B|A|526
6B4V|1|B|C|527
6B4V|1|B|A|528
6B4V|1|B|A|529
6B4V|1|B|G|530
6B4V|1|B|C|531
*
6B4V|1|B|G|2018
6B4V|1|B|A|2019
6B4V|1|B|A|2020
6B4V|1|B|C|2021
6B4V|1|B|U|2022
6B4V|1|B|G|2023
*
6B4V|1|B|C|2040
6B4V|1|B|U|2041
6B4V|1|B|A|2042
6B4V|1|B|C|2043
*
6B4V|1|B|G|2625
6B4V|1|B|C|2626
6B4V|1|B|G|2627
6B4V|1|B|C|2628
6B4V|1|B|A|2629
6B4V|1|B|G|2630
*
6B4V|1|B|C|2788
6B4V|1|B|C|2789
*
6B4V|1|B|G|2894
6B4V|1|B|U|2895
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain CA
- 50S ribosomal protein L32
- Chain F
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L13
- Chain R
- 50S ribosomal protein L20
- Chain T
- 50S ribosomal protein L22
Coloring options: