J7_6DNC_001
3D structure
- PDB id
- 6DNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 6DNC|1|B|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6DNC|1|B|C|8
6DNC|1|B|G|9
6DNC|1|B|A|10
6DNC|1|B|C|11
6DNC|1|B|U|12
6DNC|1|B|A|13
6DNC|1|B|A|14
6DNC|1|B|G|15
*
6DNC|1|B|U|525
6DNC|1|B|A|526
6DNC|1|B|C|527
6DNC|1|B|A|528
6DNC|1|B|A|529
6DNC|1|B|G|530
6DNC|1|B|C|531
*
6DNC|1|B|G|2018
6DNC|1|B|A|2019
6DNC|1|B|A|2020
6DNC|1|B|C|2021
6DNC|1|B|U|2022
6DNC|1|B|C|2023
*
6DNC|1|B|G|2040
6DNC|1|B|U|2041
6DNC|1|B|A|2042
6DNC|1|B|C|2043
*
6DNC|1|B|G|2625
6DNC|1|B|C|2626
6DNC|1|B|G|2627
6DNC|1|B|C|2628
6DNC|1|B|U|2629
6DNC|1|B|G|2630
*
6DNC|1|B|C|2788
6DNC|1|B|C|2789
*
6DNC|1|B|G|2894
6DNC|1|B|G|2895
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain FA
- 50S ribosomal protein L32
- Chain G
- 50S ribosomal protein L3
- Chain N
- 50S ribosomal protein L13
- Chain U
- 50S ribosomal protein L20
- Chain W
- 50S ribosomal protein L22
Coloring options: