J7_6ENF_001

3D structure

PDB id

6ENF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

6ENF|1|A|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ENF|1|A|C|8
6ENF|1|A|G|9
6ENF|1|A|A|10
6ENF|1|A|C|11
6ENF|1|A|U|12
6ENF|1|A|A|13
6ENF|1|A|A|14
6ENF|1|A|G|15
*
6ENF|1|A|U|525
6ENF|1|A|A|526
6ENF|1|A|C|527
6ENF|1|A|A|528
6ENF|1|A|A|529
6ENF|1|A|G|530
6ENF|1|A|C|531
*
6ENF|1|A|G|2018
6ENF|1|A|A|2019
6ENF|1|A|A|2020
6ENF|1|A|C|2021
6ENF|1|A|U|2022
6ENF|1|A|C|2023
*
6ENF|1|A|G|2040
6ENF|1|A|U|2041
6ENF|1|A|A|2042
6ENF|1|A|C|2043
*
6ENF|1|A|G|2625
6ENF|1|A|C|2626
6ENF|1|A|G|2627
6ENF|1|A|C|2628
6ENF|1|A|U|2629
6ENF|1|A|G|2630
*
6ENF|1|A|C|2788
6ENF|1|A|C|2789
*
6ENF|1|A|G|2894
6ENF|1|A|G|2895

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain Q

50S ribosomal protein L20

Chain S

50S ribosomal protein L22